Transcript: lnc-GLDC-6:2

Basic information

LNCipedia transcript ID: lnc-GLDC-6:2 
LNCipedia gene ID: lnc-GLDC-6
Location (hg19): chr9:6754933-6757867
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2935 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000107596.1|HBMT00001478863.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.7253 non-coding 
CPAT coding probability 4.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GLDC-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SNRPEP2-2:2
5.0 lnc-SNRPEP2-2:2
5.1 lnc-CER1-34:2
5.2 lnc-GLDC-6:2