Transcript: lnc-GLIPR1-2:1

Basic information

LNCipedia transcript ID: lnc-GLIPR1-2:1 
LNCipedia gene ID: lnc-GLIPR1-2
Location (hg19): chr12:76407804-76408563
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 324 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020475; NONHSAT029551
Alternative gene names: XLOC_009808; linc-ZDHHC17-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -190.3534 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GLIPR1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GLIPR1-1:1
3.1 lnc-GLIPR1-2:1
4.0 lnc-GLIPR1-2:1
4.1 lnc-GLIPR1-2:1
5.0 lnc-GLIPR1-2:1
5.1 lnc-SYT1-41:2
5.2 lnc-GLIPR1-2:1