Transcript: lnc-GLIS1-2:1

Basic information

LNCipedia transcript ID: lnc-GLIS1-2:1 
LNCipedia gene ID: lnc-GLIS1-2
Location (hg19): chr1:53881157-53905750
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 482 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT003323
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 137.2796 coding 
CPAT coding probability 3.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GLIS1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GLIS1-1:1
4.0 lnc-GLIS1-2:1
4.1 lnc-GLIS1-2:1
5.0 lnc-GLIS1-2:1
5.1 lnc-LRP8-11:1
5.2 lnc-GLIS1-2:1