Transcript: lnc-GLRB-1:1

Basic information

LNCipedia transcript ID: lnc-GLRB-1:1 
LNCipedia gene ID: lnc-GLRB-1
Location (hg19): chr4:157852970-157854283
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 667 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000505116.1; RP11-612J15.2-001; OTTHUMT00000366120.1; NONHSAT098959
Alternative gene names: ENSG00000250235.1; RP11-612J15.2; OTTHUMG00000161800.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.6396 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GLRB-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GLRB-1:1
4.0 lnc-GLRB-1:1
4.1 lnc-GLRB-1:1
5.0 lnc-GLRB-1:1
5.1 lnc-GRIA2-1:6
5.2 lnc-GLRB-1:1