Transcript: lnc-GLRX3-1:1

Basic information

LNCipedia transcript ID: lnc-GLRX3-1:1 
LNCipedia gene ID: lnc-GLRX3-1
Location (hg19): chr10:131984445-131985130
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 552 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000440388; ENST00000440388.1; RP11-500G10.5-001; OTTHUMT00000051028.1; NONHSAT017028
Alternative gene names: ENSG00000203417; RP11-500G10.5; ENSG00000203417.2; OTTHUMG00000019271.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.3264 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GLRX3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GLRX3-1:1
3.1 lnc-GLRX3-1:1
4.0 lnc-GLRX3-1:1
4.1 lnc-GLRX3-1:1
5.0 lnc-GLRX3-1:1
5.1 lnc-MGMT-17:1
5.2 lnc-GLRX3-1:1