Transcript: lnc-GLYATL2-2:4

Basic information

LNCipedia transcript ID: lnc-GLYATL2-2:4 
LNCipedia gene ID: lnc-GLYATL2-2
RefSeq ID: NR_033853
Location (hg19): chr11:58701116-58825925
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2603 bp
Exons: 6
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_033853; NR_033853.2
Alternative gene names: LOC283194


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.4984 non-coding 
CPAT coding probability 88.33% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GLYATL2-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GLYATL2-2:4
4.0 lnc-GLYATL2-2:4
4.1 lnc-GLYATL2-2:4
5.0 lnc-GLYATL2-2:4
5.1 lnc-OR5M11-31:2
5.2 lnc-GLYATL2-2:4