Transcript: lnc-GMNC-1:1

Basic information

LNCipedia transcript ID: lnc-GMNC-1:1 
LNCipedia gene ID: lnc-GMNC-1
Location (hg19): chr3:190506447-190511383
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 335 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006734; NONHSAT093958
Alternative gene names: XLOC_003372; linc-TMEM207-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.1666 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GMNC-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GMNC-1:1
3.1 lnc-GMNC-1:1
4.0 lnc-GMNC-1:1
4.1 lnc-GMNC-1:1
5.0 lnc-GMNC-1:1
5.1 lnc-LRRC15-23:1
5.2 lnc-GMNC-1:1