Transcript: lnc-GMPS-1:1

Basic information

LNCipedia transcript ID: lnc-GMPS-1:1 
LNCipedia gene ID: lnc-GMPS-1
Location (hg19): chr3:155572513-155580750
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 449 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00007014; NONHSAT092844
Alternative gene names: XLOC_002888; linc-GMPS-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.8139 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GMPS-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GMPS-1:1
3.1 lnc-GMPS-1:1
4.0 lnc-GMPS-1:1
4.1 lnc-GMPS-1:1
5.0 lnc-GMPS-1:1
5.1 lnc-LEKR1-14:1
5.2 lnc-GMPS-1:1