Transcript: lnc-GNAT3-9:1

Basic information

LNCipedia transcript ID: lnc-GNAT3-9:1 
LNCipedia gene ID: lnc-GNAT3-9
Location (hg19): chr7:79754827-79758389
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 751 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000096201.1|MICT00000327423.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.4875 non-coding 
CPAT coding probability 1.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GNAT3-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GNAT3-9:1
5.0 lnc-GNAT3-9:1
5.1 lnc-SEMA3C-9:1
5.2 lnc-GNAT3-9:1