Transcript: lnc-GNB1L-1:1

Basic information

LNCipedia transcript ID: lnc-GNB1L-1:1 
LNCipedia gene ID: lnc-GNB1L-1
Location (hg19): chr22:19696897-19702318
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 560 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000427252.1; AC000093.3-001; OTTHUMT00000317936.1
Alternative gene names: ENSG00000228287.1; AC000093.3; OTTHUMG00000150398.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -231.5181 non-coding 
CPAT coding probability 14.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GNB1L-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GNB1L-1:1
4.0 lnc-GNB1L-1:1
4.1 lnc-GNB1L-1:1
5.0 lnc-GNB1L-1:1
5.1 lnc-RTN4R-18:1
5.2 lnc-GNB1L-1:1