Transcript: lnc-GNG11-2:2

Basic information

LNCipedia transcript ID: lnc-GNG11-2:2 
LNCipedia gene ID: lnc-GNG11-2
Ensembl Gene ID: ENSG00000236861
Ensembl Transcript ID: ENST00000426634
Location (hg19): chr7:93598760-93640425
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 554 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000426634.1; AC006378.2-001; OTTHUMT00000341561.1; NONHSAT122020
Alternative gene names: ENSG00000236861.2; AC006378.2; OTTHUMG00000155775.2; ENSG00000236861.6; AC006378.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.1313 non-coding 
CPAT coding probability 13.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GNG11-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GNG11-2:2
4.0 lnc-GNG11-2:2
4.1 lnc-GNG11-2:2
5.0 lnc-GNG11-2:2
5.1 lnc-LAMTOR4-93:2
5.2 lnc-GNG11-2:2