Transcript: lnc-GOLGA4-4:6

Basic information

LNCipedia transcript ID: lnc-GOLGA4-4:6 
LNCipedia gene ID: lnc-GOLGA4-4
Location (hg19): chr3:37217868-37251557
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4437 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271993.1|HBMT00000968189.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.1655 non-coding 
CPAT coding probability 42.33% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GOLGA4-4:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GOLGA4-4:6
5.0 lnc-GOLGA4-4:6
5.1 lnc-CNOT10-40:4
5.2 lnc-GOLGA4-4:6