Transcript: lnc-GOLGA7B-1:1

Basic information

LNCipedia transcript ID: lnc-GOLGA7B-1:1 
LNCipedia gene ID: lnc-GOLGA7B-1
Location (hg19): chr10:99625988-99631337
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 660 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000423054.1; RP11-459F3.6-001; OTTHUMT00000049753.1; NONHSAT015890
Alternative gene names: ENSG00000239666.1; RP11-459F3.6; OTTHUMG00000018870.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -287.1561 non-coding 
CPAT coding probability 10.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GOLGA7B-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GOLGA7B-1:1
4.0 lnc-GOLGA7B-1:1
4.1 lnc-GOLGA7B-1:1
5.0 lnc-GOLGA7B-1:1
5.1 lnc-SMC3-176:1
5.2 lnc-GOLGA7B-1:1