Transcript: lnc-GOLGA8O-5:11

Basic information

LNCipedia transcript ID: lnc-GOLGA8O-5:11 
LNCipedia gene ID: lnc-GOLGA8O-5
Ensembl Gene ID: ENSG00000262728
Ensembl Transcript ID: ENST00000613733
Location (hg19): chr15:32878306-32906897
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 523 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000613733.4
Alternative gene names: ENSG00000262728.5; RP11-1000B6.8; AC123768.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -8.8532 non-coding 
CPAT coding probability 1.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GOLGA8O-5:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-632K20.1.1-5:5
4.1 lnc-RP11-632K20.1.1-5:5
5.0 lnc-RP11-632K20.1.1-5:5
5.1 lnc-OTUD7A-16:11
5.2 lnc-GOLGA8O-5:11