Transcript: lnc-GOLGA8O-5:7

Basic information

LNCipedia transcript ID: lnc-GOLGA8O-5:7 
LNCipedia gene ID: lnc-GOLGA8O-5
Location (hg19): chr15:32898619-32907361
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 966 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000500941; ENST00000576873.1; AC123768.4-201; NONHSAT041514
Alternative gene names: ENSG00000244952; AC123768.6; ENSG00000262728.1; AC123768.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.1442 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GOLGA8O-5:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FMN1-2:1
3.1 lnc-FMN1-5:1
4.0 lnc-RP11-632K20.1.1-5:2
4.1 lnc-RP11-632K20.1.1-5:2
5.0 lnc-RP11-632K20.1.1-5:2
5.1 lnc-OTUD7A-16:7
5.2 lnc-GOLGA8O-5:7