Transcript: lnc-GOLGA8S-5:2

Basic information

LNCipedia transcript ID: lnc-GOLGA8S-5:2 
LNCipedia gene ID: lnc-GOLGA8S-5
Location (hg19): chr15:23873169-23874538
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 415 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023300; NONHSAT040842
Alternative gene names: XLOC_011169; linc-C15orf2-13


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.6344 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GOLGA8S-5:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MKRN3-1:1
3.1 lnc-MKRN3-1:1
4.0 lnc-MKRN3-1:1
4.1 lnc-MKRN3-1:1
5.0 lnc-MKRN3-1:1
5.1 lnc-SNRPN-25:2
5.2 lnc-GOLGA8S-5:2