Transcript: lnc-GOLPH3L-1:1

Basic information

LNCipedia transcript ID: lnc-GOLPH3L-1:1 
LNCipedia gene ID: lnc-GOLPH3L-1
Location (hg19): chr1:150583859-150587960
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1992 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4
Alternative transcript names: ENST00000499705; TCONS_00000640; NONHSAT006319
Alternative gene names: ENSG00000246674; XLOC_001023; linc-MCL1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.8659 non-coding 
CPAT coding probability 1.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GOLPH3L-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GOLPH3L-1:1
3.1 lnc-GOLPH3L-1:1
4.0 lnc-GOLPH3L-1:1
4.1 lnc-GOLPH3L-1:1
5.0 lnc-GOLPH3L-1:1
5.1 lnc-GOLPH3L-1:1
5.2 lnc-GOLPH3L-1:1