Transcript: lnc-GPATCH2L-1:1

Basic information

LNCipedia transcript ID: lnc-GPATCH2L-1:1 
LNCipedia gene ID: lnc-GPATCH2L-1
Location (hg19): chr14:76695296-76701262
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2119 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT037898; FPKM1_group_9304_transcript_5
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.2326 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPATCH2L-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C14orf118-1:9
4.0 lnc-C14orf118-1:9
4.1 lnc-C14orf118-1:9
5.0 lnc-C14orf118-1:9
5.1 lnc-BATF-17:2
5.2 lnc-GPATCH2L-1:1