Transcript: lnc-GPC1-3:1

Basic information

LNCipedia transcript ID: lnc-GPC1-3:1 
LNCipedia gene ID: lnc-GPC1-3
Location (hg19): chr2:240744435-240746494
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1747 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000047301.1|MICT00000211001.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18 non-coding 
CPAT coding probability 2.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPC1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC093802.1.1-3:1
5.0 lnc-AC093802.1.1-3:1
5.1 lnc-SNED1-22:1
5.2 lnc-GPC1-3:1