Transcript: lnc-GPC2-1:2

Basic information

LNCipedia transcript ID: lnc-GPC2-1:2 
LNCipedia gene ID: lnc-GPC2-1
Location (hg19): chr7:99764222-99765758
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 548 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT122341
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1121.2355 non-coding 
CPAT coding probability 44.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GPC2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPC2-1:2
4.0 lnc-GPC2-1:2
4.1 lnc-GPC2-1:2
5.0 lnc-GPC2-1:2
5.1 lnc-C7orf43-1:2
5.2 lnc-GPC2-1:2