Transcript: lnc-GPD2-2:3

Basic information

LNCipedia transcript ID: lnc-GPD2-2:3 
LNCipedia gene ID: lnc-GPD2-2
Location (hg19): chr2:157659851-157723385
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2860 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000045225.1|MICT00000201470.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.714 non-coding 
CPAT coding probability 7.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPD2-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GPD2-2:3
5.0 lnc-GPD2-2:3
5.1 lnc-UPP2-11:2
5.2 lnc-GPD2-2:3