Transcript: lnc-GPR108-3:1

Basic information

LNCipedia transcript ID: lnc-GPR108-3:1 
LNCipedia gene ID: lnc-GPR108-3
Ensembl Gene ID: ENSG00000276980
Ensembl Transcript ID: ENST00000614781
Location (hg19): chr19:6716397-6717753
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1357 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000614781.1
Alternative gene names: ENSG00000276980.1; CTD-3128G10.7; AC008760.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.5906 non-coding 
CPAT coding probability 5.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR108-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-GPR108-3:1
4.1 lnc-GPR108-3:1
5.0 lnc-GPR108-3:1
5.1 lnc-TIMM44-36:1
5.2 lnc-GPR108-3:1