Transcript: lnc-GPR180-8:1

Basic information

LNCipedia transcript ID: lnc-GPR180-8:1 
LNCipedia gene ID: lnc-GPR180-8
Location (hg19): chr13:94751210-94761265
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 10056 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_engstrom06_BU158437_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.9244 non-coding 
CPAT coding probability 49.95% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GPR180-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR180-8:1
4.0 lnc-GPR180-8:1
4.1 lnc-GPR180-8:1
5.0 lnc-GPR180-8:1
5.1 lnc-COL4A2-146:1
5.2 lnc-GPR180-8:1