Transcript: lnc-GPR39-10:3

Basic information

LNCipedia transcript ID: lnc-GPR39-10:3 
LNCipedia gene ID: lnc-GPR39-10
Location (hg19): chr2:133012853-133205754
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 613 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000044638.1|FTMT20700066523.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.21 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR39-10:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GPR39-10:3
5.0 lnc-GPR39-10:3
5.1 lnc-GPR17-80:2
5.2 lnc-GPR39-10:3