Transcript: lnc-GPR65-6:1

Basic information

LNCipedia transcript ID: lnc-GPR65-6:1 
LNCipedia gene ID: lnc-GPR65-6
Ensembl Gene ID: ENSG00000258958
Ensembl Transcript ID: ENST00000555990
Location (hg19): chr14:87790097-87798734
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 369 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000555990; ENST00000555990.1; RP11-594C13.2-001; OTTHUMT00000413101.1; NONHSAT038153
Alternative gene names: ENSG00000258958; RP11-594C13.2; ENSG00000258958.1; OTTHUMG00000171353.1; AL157688.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -178.4455 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR65-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-322L20.1.1-6:1
3.1 lnc-RP11-322L20.1.1-6:1
4.0 lnc-RP11-322L20.1.1-6:1
4.1 lnc-RP11-322L20.1.1-6:1
5.0 lnc-RP11-322L20.1.1-6:1
5.1 lnc-GPR65-7:1
5.2 lnc-GPR65-6:1