Transcript: lnc-GPR78-1:4

Basic information

LNCipedia transcript ID: lnc-GPR78-1:4 
LNCipedia gene ID: lnc-GPR78-1
Location (hg19): chr4:8561638-8563060
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 908 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2597_chr4:8561637-8563060_ovary
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.8085 non-coding 
CPAT coding probability 2.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR78-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR78-1:4
4.0 lnc-GPR78-1:4
4.1 lnc-GPR78-1:4
5.0 lnc-GPR78-1:4
5.1 lnc-GPR78-1:4
5.2 lnc-GPR78-1:4