Transcript: lnc-GPS2-4:1

Basic information

LNCipedia transcript ID: lnc-GPS2-4:1 
LNCipedia gene ID: lnc-GPS2-4
Location (hg19): chr17:7209813-7210547
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 735 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000032935.1|ENCT00000180512.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -16.2932 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPS2-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GPS2-4:1
5.0 lnc-GPS2-4:1
5.1 lnc-YBX2-4:1
5.2 lnc-GPS2-4:1