Transcript: lnc-GRAMD2B-19:1

Basic information

LNCipedia transcript ID: lnc-GRAMD2B-19:1 
LNCipedia gene ID: lnc-GRAMD2B-19
Location (hg19): chr5:124410358-124410673
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 316 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT103549
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.2506 non-coding 
CPAT coding probability 11.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRAMD2B-19:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-43D2.2.1-19:1
4.0 lnc-RP11-43D2.2.1-19:1
4.1 lnc-RP11-43D2.2.1-19:1
5.0 lnc-RP11-43D2.2.1-19:1
5.1 lnc-PDLIM4-124:1
5.2 lnc-GRAMD2B-19:1