Transcript: lnc-GREB1-1:4

Basic information

LNCipedia transcript ID: lnc-GREB1-1:4 
LNCipedia gene ID: lnc-GREB1-1
Location (hg19): chr2:11821563-11823449
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1082 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228496.1|ENST00000455754.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -56.5052 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GREB1-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GREB1-1:4
5.0 lnc-GREB1-1:4
5.1 lnc-SNX17-174:2
5.2 lnc-GREB1-1:4