Transcript: lnc-GREM1-2:2

Basic information

LNCipedia transcript ID: lnc-GREM1-2:2 
LNCipedia gene ID: lnc-GREM1-2
Location (hg19): chr15:33131330-33142065
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5357 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000022481.1|MICT00000113945.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.0643 non-coding 
CPAT coding probability 1.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GREM1-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GREM1-2:2
5.0 lnc-GREM1-2:2
5.1 lnc-SNRPN-151:2
5.2 lnc-GREM1-2:2