Transcript: lnc-GRHL2-12:2

Basic information

LNCipedia transcript ID: lnc-GRHL2-12:2 
LNCipedia gene ID: lnc-GRHL2-12
Ensembl Gene ID: ENSG00000271882
Ensembl Transcript ID: ENST00000607176
Location (hg19): chr8:102220376-102220786
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 411 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607176.1
Alternative gene names: ENSG00000271882.1; KB-1410C5.5; AP001330.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -188.8952 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRHL2-12:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GRHL2-12:2
4.0 lnc-GRHL2-12:2
4.1 lnc-GRHL2-12:2
5.0 lnc-GRHL2-12:2
5.1 lnc-CA2-177:8
5.2 lnc-GRHL2-12:2