Transcript: lnc-GRIK1-3:1

Basic information

LNCipedia transcript ID: lnc-GRIK1-3:1 
LNCipedia gene ID: lnc-GRIK1-3
Location (hg19): chr21:30756061-30882561
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6039 bp
Exons: 20
Sources: NONCODE v4
Alternative transcript names: NONHSAT081644
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.6736 non-coding 
CPAT coding probability 4.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRIK1-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GRIK1-3:1
4.0 lnc-GRIK1-3:1
4.1 lnc-GRIK1-3:1
5.0 lnc-GRIK1-3:1
5.1 lnc-LTN1-13:1
5.2 lnc-GRIK1-3:1