Transcript: lnc-GRIK2-2:4

Basic information

LNCipedia transcript ID: lnc-GRIK2-2:4 
LNCipedia gene ID: lnc-GRIK2-2
Location (hg19): chr6:101329333-101578586
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 394 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260000.2|ENCT00000375808.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -329.381 non-coding 
CPAT coding probability 0.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRIK2-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GRIK2-2:4
5.0 lnc-GRIK2-2:4
5.1 lnc-SMPD2-80:5
5.2 lnc-GRIK2-2:4