Transcript: lnc-GRIN2A-2:2

Basic information

LNCipedia transcript ID: lnc-GRIN2A-2:2 
LNCipedia gene ID: lnc-GRIN2A-2
Location (hg19): chr16:10445297-10446612
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1316 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT140498; FPKM1_group_11293_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.7728 non-coding 
CPAT coding probability 1.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRIN2A-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GRIN2A-2:2
4.0 lnc-GRIN2A-2:2
4.1 lnc-GRIN2A-2:2
5.0 lnc-GRIN2A-2:2
5.1 lnc-PARN-83:1
5.2 lnc-GRIN2A-2:2