Transcript: lnc-GRTP1-5:1

Basic information

LNCipedia transcript ID: lnc-GRTP1-5:1 
LNCipedia gene ID: lnc-GRTP1-5
Location (hg19): chr13:113919360-113928690
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1472 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000018132.1|MICT00000099689.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.5847 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRTP1-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GRTP1-4:1
5.0 lnc-GRTP1-4:1
5.1 lnc-DCUN1D2-3:1
5.2 lnc-GRTP1-5:1