Transcript: lnc-GRXCR1-4:1

Basic information

LNCipedia transcript ID: lnc-GRXCR1-4:1 
LNCipedia gene ID: lnc-GRXCR1-4
Location (hg19): chr4:43342430-43343058
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 257 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008780; NONHSAT096206
Alternative gene names: XLOC_003526; linc-GUF1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.8928 non-coding 
CPAT coding probability 4.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRXCR1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GRXCR1-3:1
3.1 lnc-GRXCR1-4:1
4.0 lnc-GRXCR1-4:1
4.1 lnc-GRXCR1-4:1
5.0 lnc-GRXCR1-4:1
5.1 lnc-GABRB1-18:2
5.2 lnc-GRXCR1-4:1