Transcript: lnc-GRXCR1-5:1

Basic information

LNCipedia transcript ID: lnc-GRXCR1-5:1 
LNCipedia gene ID: lnc-GRXCR1-5
Location (hg19): chr4:43765515-43768276
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2076 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00008060
Alternative gene names: XLOC_003527; linc-GUF1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.4926 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRXCR1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GRXCR1-4:1
3.1 lnc-GRXCR1-5:1
4.0 lnc-GRXCR1-5:1
4.1 lnc-GRXCR1-5:1
5.0 lnc-GRXCR1-5:1
5.1 lnc-GABRB1-16:3
5.2 lnc-GRXCR1-5:1