Transcript: lnc-GTDC1-27:6

Basic information

LNCipedia transcript ID: lnc-GTDC1-27:6 
LNCipedia gene ID: lnc-GTDC1-27
Location (hg19): chr2:144431442-144431848
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 407 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: uc_72_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -110.0598 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GTDC1-27:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GTDC1-14:1
4.0 lnc-GTDC1-14:1
4.1 lnc-GTDC1-2:8
5.0 lnc-GTDC1-2:8
5.1 lnc-MMADHC-91:6
5.2 lnc-GTDC1-27:6