Transcript: lnc-GTF2B-15:2

Basic information

LNCipedia transcript ID: lnc-GTF2B-15:2 
LNCipedia gene ID: lnc-GTF2B-15
Location (hg19): chr1:89003196-89150887
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3532 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT004325
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -156.504 non-coding 
CPAT coding probability 4.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GTF2B-15:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GTF2B-1:3
4.0 PKN2-AS1:2
4.1 PKN2-AS1:2
5.0 PKN2-AS1:2
5.1 lnc-RBMXL1-15:2
5.2 lnc-GTF2B-15:2