Transcript: lnc-GTF2H5-24:2

Basic information

LNCipedia transcript ID: lnc-GTF2H5-24:2 
LNCipedia gene ID: lnc-GTF2H5-24
Location (hg19): chr6:158703302-158733691
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 718 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT115735
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -77.1049 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GTF2H5-24:2 yes no no no

Available literature

  1. Zhu (2015), Microarray analysis of Long non-coding RNA expression profiles in human gastric cells and tissues with Helicobacter pylori Infection., BMC Med Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TULP4-1:2
4.0 lnc-TULP4-1:2
4.1 lnc-TULP4-1:2
5.0 lnc-TULP4-1:2
5.1 lnc-GTF2H5-3:2
5.2 lnc-GTF2H5-24:2