Transcript: lnc-GTF3C1-4:2

Basic information

LNCipedia transcript ID: lnc-GTF3C1-4:2 
LNCipedia gene ID: lnc-GTF3C1-4
Location (hg19): chr16:27268663-27280045
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 259 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT141436
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 440.2778 coding 
CPAT coding probability 42.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GTF3C1-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GTF3C1-4:2
4.0 lnc-GTF3C1-4:2
4.1 lnc-GTF3C1-4:2
5.0 lnc-GTF3C1-4:2
5.1 lnc-SULT1A2-55:2
5.2 lnc-GTF3C1-4:2