Transcript: lnc-GTF3C6-1:3

Basic information

LNCipedia transcript ID: lnc-GTF3C6-1:3 
LNCipedia gene ID: lnc-GTF3C6-1
Location (hg19): chr6:111347328-111349465
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2138 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT114444
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -110.7922 non-coding 
CPAT coding probability 1.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GTF3C6-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPF2-1:1
4.0 lnc-RPF2-1:1
4.1 lnc-RPF2-1:1
5.0 lnc-RPF2-1:1
5.1 lnc-SLC16A10-1:1
5.2 lnc-GTF3C6-1:3