Transcript: lnc-GTPBP4-3:9

Basic information

LNCipedia transcript ID: lnc-GTPBP4-3:9 
LNCipedia gene ID: lnc-GTPBP4-3
Location (hg19): chr10:977934-991050
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4289 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229869.1|HBMT00000136787.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 155.6047 coding 
CPAT coding probability 87.05% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GTPBP4-3:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GTPBP4-3:9
5.0 lnc-GTPBP4-3:9
5.1 lnc-NPY4R2-551:5
5.2 lnc-GTPBP4-3:9