Transcript: lnc-GTSF1L-10:1

Basic information

LNCipedia transcript ID: lnc-GTSF1L-10:1 
LNCipedia gene ID: lnc-GTSF1L-10
Location (hg19): chr20:42284073-42286143
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2071 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000054890.1|ENCT00000267090.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.5589 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GTSF1L-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GTSF1L-10:1
5.0 lnc-GTSF1L-10:1
5.1 lnc-MATN4-45:1
5.2 lnc-GTSF1L-10:1