Transcript: lnc-GUCA1C-2:1

Basic information

LNCipedia transcript ID: lnc-GUCA1C-2:1 
LNCipedia gene ID: lnc-GUCA1C-2
Location (hg19): chr3:108582129-108622876
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 589 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_2431_chr3:108582128-108622876_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.906 non-coding 
CPAT coding probability 4.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GUCA1C-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GUCA1C-2:1
4.0 lnc-GUCA1C-2:1
4.1 lnc-GUCA1C-2:1
5.0 lnc-GUCA1C-2:1
5.1 lnc-IFT57-14:1
5.2 lnc-GUCA1C-2:1