Transcript: lnc-GXYLT2-1:1

Basic information

LNCipedia transcript ID: lnc-GXYLT2-1:1 
LNCipedia gene ID: lnc-GXYLT2-1
Location (hg19): chr3:72639370-73447965
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1702 bp
Exons: 4
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000509224
Alternative gene names: ENSG00000249953


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -77.4032 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GXYLT2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GXYLT2-1:1
3.1 lnc-GXYLT2-1:1
4.0 lnc-GXYLT2-1:1
4.1 lnc-GXYLT2-1:1
5.0 lnc-GXYLT2-1:1
5.1 lnc-FRG2C-1:6
5.2 lnc-GXYLT2-1:1