Transcript: lnc-GYPB-2:5

Basic information

LNCipedia transcript ID: lnc-GYPB-2:5 
LNCipedia gene ID: lnc-GYPB-2
Location (hg19): chr4:144917350-144940477
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 508 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT098583
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.5433 non-coding 
CPAT coding probability 40.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GYPB-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GYPA-2:6
4.0 lnc-GYPA-2:6
4.1 lnc-GYPA-2:6
5.0 lnc-GYPA-2:6
5.1 lnc-SLC10A7-29:5
5.2 lnc-GYPB-2:5