Transcript: lnc-H1FNT-1:6

Basic information

LNCipedia transcript ID: lnc-H1FNT-1:6 
LNCipedia gene ID: lnc-H1FNT-1
Location (hg19): chr12:48744855-48757226
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 11969 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000257735.1|ENCT00000090602.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 26.5318 non-coding 
CPAT coding probability 5.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-H1FNT-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-H1FNT-1:6
5.0 lnc-H1FNT-1:6
5.1 lnc-TEX49-12:5
5.2 lnc-H1FNT-1:6