Transcript: lnc-H2AFV-5:1

Basic information

LNCipedia transcript ID: lnc-H2AFV-5:1 
LNCipedia gene ID: lnc-H2AFV-5
Location (hg19): chr7:44786222-44787942
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1721 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000095801.1|ENCT00000411474.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -62.6491 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-H2AFV-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-H2AFV-5:1
5.0 lnc-H2AFV-5:1
5.1 lnc-TNS3-32:1
5.2 lnc-H2AFV-5:1