Transcript: lnc-HAO2-11:1

Basic information

LNCipedia transcript ID: lnc-HAO2-11:1 
LNCipedia gene ID: lnc-HAO2-11
Location (hg19): chr1:119837653-119840574
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 379 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000015003.1|FTMT20300058510.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -98.0568 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HAO2-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HAO2-11:1
5.0 lnc-HAO2-11:1
5.1 lnc-HAO2-11:1
5.2 lnc-HAO2-11:1